Transcript: lnc-CAPS-2:4

Basic information

LNCipedia transcript ID: lnc-CAPS-2:4 
LNCipedia gene ID: lnc-CAPS-2
Location (hg38): chr19:5978397-5980690
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 307 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA659:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.4711 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPS-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CAPS-2:4
4.1 lnc-CAPS-2:4
5.0 lnc-CAPS-2:4
5.1 lnc-RPL36-14:6
5.2 lnc-CAPS-2:4