Transcript: lnc-CAPRIN2-2:12

Basic information

LNCipedia transcript ID: lnc-CAPRIN2-2:12 
LNCipedia gene ID: lnc-CAPRIN2-2
Location (hg38): chr12:30997038-31006006
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 619 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226472.3|ENST00000222396.5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.838 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPRIN2-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAPRIN2-2:12
5.0 lnc-CAPRIN2-2:12
5.1 lnc-WBP11-131:6
5.2 lnc-CAPRIN2-2:12