Transcript: lnc-CAPNS1-3:1

Basic information

LNCipedia transcript ID: lnc-CAPNS1-3:1 
LNCipedia gene ID: lnc-CAPNS1-3
Location (hg38): chr19:36228459-36235868
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 571 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT065971
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 4 non-coding 
PhyloCSF score -164.6386 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CAPNS1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAPNS1-3:1
4.0 lnc-CAPNS1-3:1
4.1 lnc-CAPNS1-3:1
5.0 lnc-CAPNS1-3:1
5.1 lnc-ZNF345-21:1
5.2 lnc-CAPNS1-3:1