Transcript: lnc-CALML4-7:1

Basic information

LNCipedia transcript ID: lnc-CALML4-7:1 
LNCipedia gene ID: lnc-CALML4-7
Location (hg38): chr15:67759617-67811773
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 794 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_1179_chr15:68051954-68053074_lymphNode
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.8369 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CALML4-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALML4-7:1
4.0 lnc-CALML4-7:1
4.1 lnc-CALML4-7:1
5.0 lnc-CALML4-7:1
5.1 lnc-CALML4-7:1
5.2 lnc-CALML4-7:1