Transcript: lnc-CADM2-7:4

Basic information

LNCipedia transcript ID: lnc-CADM2-7:4 
LNCipedia gene ID: lnc-CADM2-7
Location (hg38): chr3:81840589-81857233
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 465 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00006899
Alternative gene names: XLOC_002719; linc-CADM2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.0163 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CADM2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CADM2-7:4
3.1 lnc-CADM2-7:4
4.0 lnc-CADM2-7:4
4.1 lnc-CADM2-7:4
5.0 lnc-CADM2-7:4
5.1 lnc-CADM2-7:4
5.2 lnc-CADM2-7:4