Transcript: lnc-CA1-2:3

Basic information

LNCipedia transcript ID: lnc-CA1-2:3 
LNCipedia gene ID: lnc-CA1-2
Location (hg38): chr8:85218671-85220374
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 759 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127519
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -110.7471 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CA1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-219B4.5.1-2:3
4.0 lnc-RP11-219B4.5.1-2:3
4.1 lnc-RP11-219B4.5.1-2:3
5.0 lnc-RP11-219B4.5.1-2:3
5.1 lnc-ZNF706-245:3
5.2 lnc-CA1-2:3