Transcript: lnc-C8orf89-3:1

Basic information

LNCipedia transcript ID: lnc-C8orf89-3:1 
LNCipedia gene ID: lnc-C8orf89-3
Location (hg38): chr8:73290271-73291137
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 530 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127238
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
TTHFVEGGDAGNR 100% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 221.7355 coding 
CPAT coding probability 7.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C8orf89-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL7-3:1
4.0 lnc-RPL7-3:1
4.1 lnc-RPL7-3:1
5.0 lnc-RPL7-3:1
5.1 lnc-CPA6-95:1
5.2 lnc-C8orf89-3:1