Transcript: lnc-C7orf57-6:9

Basic information

LNCipedia transcript ID: lnc-C7orf57-6:9 
LNCipedia gene ID: lnc-C7orf57-6
Location (hg38): chr7:46969702-46983429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1138 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT120508; FPKM1_group_29667_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.4845 non-coding 
CPAT coding probability 5.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C7orf57-6:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf65-3:4
4.0 lnc-C7orf65-3:4
4.1 lnc-C7orf65-3:4
5.0 lnc-C7orf65-3:4
5.1 lnc-CCT6A-105:9
5.2 lnc-C7orf57-6:9