Transcript: lnc-C6orf222-4:2

Basic information

LNCipedia transcript ID: lnc-C6orf222-4:2 
LNCipedia gene ID: lnc-C6orf222-4
Location (hg38): chr6:36238486-36248347
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8048 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088178.1|MICT00000302556.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.5399 non-coding 
CPAT coding probability 11.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C6orf222-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf222-4:2
5.0 lnc-C6orf222-4:2
5.1 lnc-CPNE5-16:1
5.2 lnc-C6orf222-4:2