Transcript: lnc-C5orf38-1:10

Basic information

LNCipedia transcript ID: lnc-C5orf38-1:10 
LNCipedia gene ID: lnc-C5orf38-1
RefSeq ID: NR_136207
Location (hg38): chr5:2917854-2920528
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136207.1
Alternative gene names: LOC105374620


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.2672 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf38-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CARD6-352:1
5.1 lnc-CARD6-352:1
5.2 lnc-C5orf38-1:10