Transcript: lnc-C2orf78-2:2

Basic information

LNCipedia transcript ID: lnc-C2orf78-2:2 
LNCipedia gene ID: lnc-C2orf78-2
Location (hg38): chr2:73839482-73840207
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 726 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr2_5969_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.1721 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf78-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C2orf78-2:2
4.0 lnc-C2orf78-2:2
4.1 lnc-C2orf78-2:2
5.0 lnc-C2orf78-2:2
5.1 lnc-POLE4-49:2
5.2 lnc-C2orf78-2:2