Transcript: lnc-C2CD4B-13:4

Basic information

LNCipedia transcript ID: lnc-C2CD4B-13:4 
LNCipedia gene ID: lnc-C2CD4B-13
RefSeq ID: NR_026897
Location (hg38): chr15:62637172-62645181
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2315 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026897; NR_026897.1
Alternative gene names: MGC15885


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.3964 non-coding 
CPAT coding probability 8.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4B-13:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-625H11.1.1-1:3
4.0 lnc-RP11-625H11.1.1-1:3
4.1 lnc-RP11-625H11.1.1-1:3
5.0 lnc-RP11-625H11.1.1-1:3
5.1 lnc-ICE2-58:4
5.2 lnc-C2CD4B-13:4