Transcript: lnc-C2CD4B-11:2

Basic information

LNCipedia transcript ID: lnc-C2CD4B-11:2 
LNCipedia gene ID: lnc-C2CD4B-11
Location (hg38): chr15:62379218-62390472
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 401 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025218.1|HBMT00000501831.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -224.091 non-coding 
CPAT coding probability 6.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4B-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2CD4B-11:2
5.0 lnc-C2CD4B-11:2
5.1 lnc-ICE2-55:1
5.2 lnc-C2CD4B-11:2