Transcript: lnc-C20orf203-1:5

Basic information

LNCipedia transcript ID: lnc-C20orf203-1:5 
LNCipedia gene ID: lnc-C20orf203-1
Location (hg38): chr20:32650390-32651759
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 668 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000360785.5
Alternative gene names: ENSG00000198547.8; C20orf203


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.1714 non-coding 
CPAT coding probability 77.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C20orf203-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-COMMD7-1:6
4.1 lnc-COMMD7-1:6
5.0 lnc-COMMD7-1:6
5.1 lnc-MMP24OS-47:5
5.2 lnc-C20orf203-1:5