Transcript: lnc-C1QTNF1-8:2

Basic information

LNCipedia transcript ID: lnc-C1QTNF1-8:2 
LNCipedia gene ID: lnc-C1QTNF1-8
Location (hg38): chr17:78841035-78846841
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5807 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032548.1|ENCT00000178797.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.5456 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C1QTNF1-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1QTNF1-8:2
5.0 lnc-C1QTNF1-8:2
5.1 lnc-ZACN-59:1
5.2 lnc-C1QTNF1-8:2