Transcript: lnc-C17orf58-5:1

Basic information

LNCipedia transcript ID: lnc-C17orf58-5:1 
LNCipedia gene ID: lnc-C17orf58-5
Location (hg38): chr17:67763958-67765823
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 253 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025738; NONHSAT055436
Alternative gene names: XLOC_012554; linc-PSMD12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.4419 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C17orf58-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C17orf58-2:1
3.1 lnc-C17orf58-5:1
4.0 lnc-C17orf58-5:1
4.1 lnc-C17orf58-5:1
5.0 lnc-C17orf58-5:1
5.1 lnc-CYB561-87:1
5.2 lnc-C17orf58-5:1