Transcript: lnc-C16orf78-6:1

Basic information

LNCipedia transcript ID: lnc-C16orf78-6:1 
LNCipedia gene ID: lnc-C16orf78-6
Location (hg38): chr16:49372581-49372794
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 214 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucExp_399_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.4927 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C16orf78-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf78-6:1
4.0 lnc-C16orf78-6:1
4.1 lnc-C16orf78-6:1
5.0 lnc-C16orf78-6:1
5.1 lnc-ADGRG1-157:1
5.2 lnc-C16orf78-6:1