Transcript: lnc-C16orf78-5:4

Basic information

LNCipedia transcript ID: lnc-C16orf78-5:4 
LNCipedia gene ID: lnc-C16orf78-5
Location (hg38): chr16:49289400-49290119
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 480 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT142369
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.4232 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C16orf78-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf78-5:4
4.0 lnc-C16orf78-5:4
4.1 lnc-C16orf78-5:4
5.0 lnc-C16orf78-5:4
5.1 lnc-ADGRG1-158:13
5.2 lnc-C16orf78-5:4