Transcript: lnc-C12orf74-19:1

Basic information

LNCipedia transcript ID: lnc-C12orf74-19:1 
LNCipedia gene ID: lnc-C12orf74-19
Ensembl Gene ID: ENSG00000257863
Ensembl Transcript ID: ENST00000551075
Location (hg38): chr12:91901458-91906187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1011 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551075; ENST00000551075.1; RP11-587P21.3-001; OTTHUMT00000407216.1; NONHSAT029868
Alternative gene names: ENSG00000257863; RP11-587P21.3; ENSG00000257863.1; OTTHUMG00000170090.1; AC090049.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.0421 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C12orf74-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLLU1.1-3:1
3.1 lnc-CLLU1.1-3:1
4.0 lnc-CLLU1.1-3:1
4.1 lnc-CLLU1.1-3:1
5.0 lnc-CLLU1.1-3:1
5.1 lnc-C12orf74-4:1
5.2 lnc-C12orf74-19:1