Transcript: lnc-C12orf43-3:1

Basic information

LNCipedia transcript ID: lnc-C12orf43-3:1 
LNCipedia gene ID: lnc-C12orf43-3
Location (hg38): chr12:121000486-121001268
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 783 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606238.1
Alternative gene names: ENSG00000271769.1; RP11-216P16.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.3249 non-coding 
CPAT coding probability 58.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C12orf43-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C12orf43-3:1
4.0 lnc-C12orf43-3:1
4.1 lnc-C12orf43-3:1
5.0 lnc-C12orf43-3:1
5.1 lnc-SRSF9-13:1
5.2 lnc-C12orf43-3:1