Transcript: lnc-C10orf143-46:17

Basic information

LNCipedia transcript ID: lnc-C10orf143-46:17 
LNCipedia gene ID: lnc-C10orf143-46
Location (hg38): chr10:130079551-130079860
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 202 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140000; FPKM1_group_4117_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -325.6037 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C10orf143-46:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EBF3-2:7
4.0 LINC00959:7
4.1 LINC00959:7
5.0 LINC00959:7
5.1 lnc-CALY-46:17
5.2 lnc-C10orf143-46:17