Transcript: lnc-BZW1-1:1

Basic information

LNCipedia transcript ID: lnc-BZW1-1:1 
LNCipedia gene ID: lnc-BZW1-1
Location (hg38): chr2:200824673-200827338
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2666 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000568571.1; RP11-469M7.1-001; OTTHUMT00000431718.1; NONHSAT076328
Alternative gene names: ENSG00000260006.1; RP11-469M7.1; OTTHUMG00000176282.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0229 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BZW1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BZW1-1:1
4.0 lnc-BZW1-1:1
4.1 lnc-BZW1-1:1
5.0 lnc-BZW1-1:1
5.1 lnc-NDUFB3-7:1
5.2 lnc-BZW1-1:1