Transcript: lnc-BTG2-2:4

Basic information

LNCipedia transcript ID: lnc-BTG2-2:4 
LNCipedia gene ID: lnc-BTG2-2
Location (hg38): chr1:203395604-203400129
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3274 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001248; NONHSAT008891
Alternative gene names: XLOC_000529; linc-PRELP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.9057 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BTG2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BTG2-2:4
3.1 lnc-BTG2-2:4
4.0 lnc-BTG2-2:4
4.1 lnc-BTG2-2:4
5.0 lnc-BTG2-2:4
5.1 lnc-ADORA1-9:5
5.2 lnc-BTG2-2:4