Transcript: lnc-BRF2-3:1

Basic information

LNCipedia transcript ID: lnc-BRF2-3:1 
LNCipedia gene ID: lnc-BRF2-3
Location (hg38): chr8:37693877-37696638
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2762 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000102214.1|ENCT00000434495.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.2845 non-coding 
CPAT coding probability 7.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF2-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-863K10.7.1-3:1
5.0 lnc-RP11-863K10.7.1-3:1
5.1 lnc-C8orf86-41:1
5.2 lnc-BRF2-3:1