Transcript: lnc-BRF1-1:6

Basic information

LNCipedia transcript ID: lnc-BRF1-1:6 
LNCipedia gene ID: lnc-BRF1-1
RefSeq ID: NR_125384
Location (hg38): chr14:105417581-105419739
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1582 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125384; NR_125384.1
Alternative gene names: LOC100507437


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.0033 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRF1-1:6
4.0 lnc-BRF1-1:6
4.1 lnc-BRF1-1:6
5.0 lnc-BRF1-1:6
5.1 lnc-AKT1-24:3
5.2 lnc-BRF1-1:6