Transcript: lnc-BRD3OS-1:4

Basic information

LNCipedia transcript ID: lnc-BRD3OS-1:4 
LNCipedia gene ID: lnc-BRD3OS-1
Location (hg38): chr9:134029039-134034666
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 232 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT135364; ENST00000605164.1
Alternative gene names: ENSG00000235106.4; LINC00094; ENSG00000235106.8; FLJ35348; bA374P20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.4516 non-coding 
CPAT coding probability 10.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD3OS-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR5-3:15
4.0 LINC00094:16
4.1 LINC00094:16
5.0 LINC00094:16
5.1 lnc-SURF2-33:4
5.2 lnc-BRD3OS-1:4