Transcript: lnc-BRD3-1:8

Basic information

LNCipedia transcript ID: lnc-BRD3-1:8 
LNCipedia gene ID: lnc-BRD3-1
Location (hg38): chr9:134132242-134135698
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 745 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273249.1|ENST00000610187.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.697 non-coding 
CPAT coding probability 47.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRD3-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BRD3-1:8
5.0 lnc-BRD3-1:8
5.1 lnc-SURF1-20:6
5.2 lnc-BRD3-1:8