Transcript: lnc-BRD1-29:8

Basic information

LNCipedia transcript ID: lnc-BRD1-29:8 
LNCipedia gene ID: lnc-BRD1-29
Location (hg38): chr22:48474602-48476347
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1401 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087379
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.1831 non-coding 
CPAT coding probability 15.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRD1-29:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTA-299D3.8.1-1:3
4.0 lnc-CTA-299D3.8.1-1:3
4.1 lnc-CTA-299D3.8.1-1:3
5.0 lnc-CTA-299D3.8.1-1:3
5.1 lnc-BRD1-20:8
5.2 lnc-BRD1-29:8