Transcript: lnc-BPI-33:4

Basic information

LNCipedia transcript ID: lnc-BPI-33:4 
LNCipedia gene ID: lnc-BPI-33
Ensembl Gene ID: ENSG00000285347
Ensembl Transcript ID: ENST00000479646
Location (hg38): chr20:38260206-38288947
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT079644; ENST00000479646.1
Alternative gene names: ENSG00000285347.1; AL359555.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.0567 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BPI-33:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LBP-3:2
4.0 lnc-LBP-3:2
4.1 lnc-LBP-3:2
5.0 lnc-LBP-3:2
5.1 lnc-DLGAP4-33:5
5.2 lnc-BPI-33:4