Transcript: lnc-BPI-33:3

Basic information

LNCipedia transcript ID: lnc-BPI-33:3 
LNCipedia gene ID: lnc-BPI-33
RefSeq ID: NR_104170
Location (hg38): chr20:38260175-38288947
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 414 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104170.1
Alternative gene names: LOC149684


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.0567 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BPI-33:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DLGAP4-33:4
5.1 lnc-DLGAP4-33:4
5.2 lnc-BPI-33:3