Transcript: lnc-BORCS8-MEF2B-1:2

Basic information

LNCipedia transcript ID: lnc-BORCS8-MEF2B-1:2 
LNCipedia gene ID: lnc-BORCS8-MEF2B-1
Location (hg38): chr19:19132658-19138447
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 347 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT063020
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -193.8411 non-coding 
CPAT coding probability 4.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BORCS8-MEF2B-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEF2BNB-MEF2B-1:2
4.0 lnc-TMEM161A-1:11
4.1 lnc-TMEM161A-1:11
5.0 lnc-TMEM161A-1:11
5.1 lnc-PALM3-140:2
5.2 lnc-BORCS8-MEF2B-1:2