Transcript: lnc-BIRC2-9:4

Basic information

LNCipedia transcript ID: lnc-BIRC2-9:4 
LNCipedia gene ID: lnc-BIRC2-9
Ensembl Gene ID: ENSG00000255337
Ensembl Transcript ID: ENST00000528717
Location (hg38): chr11:102452919-102462008
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 692 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000528717.1; RP11-315O6.1-001; OTTHUMT00000394185.1
Alternative gene names: ENSG00000255337.1; RP11-315O6.1; OTTHUMG00000167327.1; AP001830.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.0657 non-coding 
CPAT coding probability 17.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BIRC2-9:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-315O6.2.1-1:1
4.0 lnc-RP11-315O6.2.1-1:1
4.1 lnc-RP11-315O6.2.1-1:1
5.0 lnc-RP11-315O6.2.1-1:1
5.1 lnc-DYNC2H1-9:4
5.2 lnc-BIRC2-9:4