Transcript: lnc-BBOX1-1:14

Basic information

LNCipedia transcript ID: lnc-BBOX1-1:14 
LNCipedia gene ID: lnc-BBOX1-1
RefSeq ID: NR_131169
Location (hg38): chr11:27471731-27476221
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1348 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131169.1
Alternative gene names: LOC105376671


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.3245 non-coding 
CPAT coding probability 2.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BBOX1-1:14 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-QSER1-53:3
5.1 lnc-QSER1-53:3
5.2 lnc-BBOX1-1:14