Transcript: lnc-BBOX1-1:13

Basic information

LNCipedia transcript ID: lnc-BBOX1-1:13 
LNCipedia gene ID: lnc-BBOX1-1
RefSeq ID: NR_131170
Location (hg38): chr11:27471731-27482433
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 537 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131170.1
Alternative gene names: LOC105376671


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.3245 non-coding 
CPAT coding probability 3.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BBOX1-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-QSER1-53:2
5.1 lnc-QSER1-53:2
5.2 lnc-BBOX1-1:13