Transcript: lnc-BATF3-2:13

Basic information

LNCipedia transcript ID: lnc-BATF3-2:13 
LNCipedia gene ID: lnc-BATF3-2
Location (hg38): chr1:212624338-212638520
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13747 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235862.2|HBMT00000085882.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 276.5612 coding 
CPAT coding probability 97.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BATF3-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BATF3-2:13
5.0 lnc-BATF3-2:13
5.1 lnc-IRF6-55:8
5.2 lnc-BATF3-2:13