Transcript: lnc-BAG3-4:5

Basic information

LNCipedia transcript ID: lnc-BAG3-4:5 
LNCipedia gene ID: lnc-BAG3-4
Location (hg38): chr10:119596550-119600749
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4200 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000116621.1|FTMT24000006662.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.0261 non-coding 
CPAT coding probability 8.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BAG3-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BAG3-4:5
5.0 lnc-BAG3-4:5
5.1 lnc-EDRF1-78:3
5.2 lnc-BAG3-4:5