Transcript: lnc-B3GNT10-2:1

Basic information

LNCipedia transcript ID: lnc-B3GNT10-2:1 
LNCipedia gene ID: lnc-B3GNT10-2
Location (hg38): chr9:119369529-119372729
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2437 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016147; NONHSAT134492
Alternative gene names: XLOC_007543; linc-CEP110-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.4237 non-coding 
CPAT coding probability 10.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GNT10-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-295D22.1.1-2:1
3.1 lnc-RP11-295D22.1.1-2:1
4.0 lnc-RP11-295D22.1.1-2:1
4.1 lnc-RP11-295D22.1.1-2:1
5.0 lnc-RP11-295D22.1.1-2:1
5.1 lnc-B3GNT10-10:1
5.2 lnc-B3GNT10-2:1