Transcript: lnc-B3GALT1-1:1

Basic information

LNCipedia transcript ID: lnc-B3GALT1-1:1 
LNCipedia gene ID: lnc-B3GALT1-1
Location (hg38): chr2:167956748-167973545
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 365 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1981_chr2:168813257-168830055_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.1681 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GALT1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B3GALT1-1:1
4.0 lnc-B3GALT1-1:1
4.1 lnc-B3GALT1-1:1
5.0 lnc-B3GALT1-1:1
5.1 lnc-PHOSPHO2-20:1
5.2 lnc-B3GALT1-1:1