Transcript: lnc-B3GALNT2-1:1

Basic information

LNCipedia transcript ID: lnc-B3GALNT2-1:1 
LNCipedia gene ID: lnc-B3GALNT2-1
Location (hg38): chr1:235419515-235426983
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 337 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000430613.2
Alternative gene names: ENSG00000243533.2; TBCE-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -214.3948 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-B3GALNT2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B3GALNT2-1:1
4.0 lnc-B3GALNT2-1:1
4.1 lnc-B3GALNT2-1:1
5.0 lnc-B3GALNT2-1:1
5.1 lnc-MTRNR2L11-26:1
5.2 lnc-B3GALNT2-1:1