Transcript: lnc-AUTS2-6:2

Basic information

LNCipedia transcript ID: lnc-AUTS2-6:2 
LNCipedia gene ID: lnc-AUTS2-6
Location (hg38): chr7:69062396-69062851
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 376 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000092533.1|HBMT00001314112.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.3486 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AUTS2-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AUTS2-6:2
5.0 lnc-AUTS2-6:2
5.1 lnc-TPST1-80:2
5.2 lnc-AUTS2-6:2