Transcript: lnc-ATXN7-16:4

Basic information

LNCipedia transcript ID: lnc-ATXN7-16:4 
LNCipedia gene ID: lnc-ATXN7-16
Ensembl Gene ID: ENSG00000285399
Ensembl Transcript ID: ENST00000642539
Location (hg38): chr3:63864640-63867057
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 465 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642539.1
Alternative gene names: ENSG00000285399.1; AC104162.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -67.9462 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATXN7-16:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ATXN7-16:4
5.1 lnc-ATXN7-16:4
5.2 lnc-ATXN7-16:4