Transcript: lnc-ATP6V1G2-DDX39B-5:1

Basic information

LNCipedia transcript ID: lnc-ATP6V1G2-DDX39B-5:1 
LNCipedia gene ID: lnc-ATP6V1G2-DDX39B-5
Location (hg38): chr6:31497046-31497900
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 855 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000201680.1|ENCT00000383852.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.4566 non-coding 
CPAT coding probability 22.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1G2-DDX39B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1G2-DDX39B-5:1
5.0 lnc-ATP6V1G2-DDX39B-5:1
5.1 lnc-NCR3-10:1
5.2 lnc-ATP6V1G2-DDX39B-5:1