Transcript: lnc-ATP6V1B2-11:1

Basic information

LNCipedia transcript ID: lnc-ATP6V1B2-11:1 
LNCipedia gene ID: lnc-ATP6V1B2-11
Location (hg38): chr8:20187279-20187553
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 275 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000098096.1|FTMT23200001002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -227.6184 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1B2-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1B2-11:1
5.0 lnc-ATP6V1B2-11:1
5.1 lnc-SH2D4A-15:1
5.2 lnc-ATP6V1B2-11:1