Transcript: lnc-ATP23-89:8

Basic information

LNCipedia transcript ID: lnc-ATP23-89:8 
LNCipedia gene ID: lnc-ATP23-89
Location (hg38): chr12:58805944-58812654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 342 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT029031; FPKM1_group_6334_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.6517 non-coding 
CPAT coding probability 13.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP23-89:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC16A7-3:5
4.0 lnc-RP11-362K2.2.1-3:8
4.1 lnc-RP11-362K2.2.1-3:8
5.0 lnc-RP11-362K2.2.1-3:8
5.1 lnc-CDK2-89:8
5.2 lnc-ATP23-89:8