Transcript: lnc-ATP10A-69:1

Basic information

LNCipedia transcript ID: lnc-ATP10A-69:1 
LNCipedia gene ID: lnc-ATP10A-69
Ensembl Gene ID: ENSG00000261529
Ensembl Transcript ID: ENST00000565581
Location (hg38): chr15:25345633-25347235
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1603 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565581.1; RP13-487P22.1-001; OTTHUMT00000434205.1; NONHSAT041141
Alternative gene names: ENSG00000261529.1; RP13-487P22.1; OTTHUMG00000176881.1; AC100774.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.3153 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP10A-69:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP10A-3:1
4.0 lnc-ATP10A-3:1
4.1 lnc-ATP10A-3:1
5.0 lnc-ATP10A-3:1
5.1 lnc-ATP10A-10:1
5.2 lnc-ATP10A-69:1