Transcript: lnc-ATIC-2:6

Basic information

LNCipedia transcript ID: lnc-ATIC-2:6 
LNCipedia gene ID: lnc-ATIC-2
Location (hg38): chr2:215435907-215438952
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3046 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230695.1|ENCT00000235576.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.0933 non-coding 
CPAT coding probability 35.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATIC-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATIC-2:6
5.0 lnc-ATIC-2:6
5.1 lnc-TMEM169-25:4
5.2 lnc-ATIC-2:6