Transcript: lnc-ATIC-10:1

Basic information

LNCipedia transcript ID: lnc-ATIC-10:1 
LNCipedia gene ID: lnc-ATIC-10
Location (hg38): chr2:215426374-215427880
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 773 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2028_chr2:216291096-216292603
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.5316 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATIC-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATIC-10:1
4.0 lnc-ATIC-10:1
4.1 lnc-ATIC-10:1
5.0 lnc-ATIC-10:1
5.1 lnc-TMEM169-26:1
5.2 lnc-ATIC-10:1