Transcript: lnc-ATG5-31:1

Basic information

LNCipedia transcript ID: lnc-ATG5-31:1 
LNCipedia gene ID: lnc-ATG5-31
Ensembl Gene ID: ENSG00000284999
Ensembl Transcript ID: ENST00000644129
Location (hg38): chr6:105679378-105893041
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 395 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644129.1
Alternative gene names: ENSG00000284999.1; AL591518.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -174.1603 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG5-31:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX3-31:1
5.1 lnc-SNX3-31:1
5.2 lnc-ATG5-31:1