Transcript: lnc-ATAD2B-14:3

Basic information

LNCipedia transcript ID: lnc-ATAD2B-14:3 
LNCipedia gene ID: lnc-ATAD2B-14
Location (hg38): chr2:22872501-22944334
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 505 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_1794_chr2:23095372-23167206_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1419 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD2B-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC011239.1.1-12:3
4.0 lnc-AC011239.1.1-12:3
4.1 lnc-AC011239.1.1-12:3
5.0 lnc-AC011239.1.1-12:3
5.1 lnc-DNAJC27-56:3
5.2 lnc-ATAD2B-14:3