Transcript: lnc-ASCL1-6:7

Basic information

LNCipedia transcript ID: lnc-ASCL1-6:7 
LNCipedia gene ID: lnc-ASCL1-6
RefSeq ID: NR_126333
Location (hg38): chr12:103151842-103168309
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 927 bp
Exons: 7
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126333.1
Alternative gene names: LOC101929058


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.364 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASCL1-6:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-STAB2-6:7
5.1 lnc-STAB2-6:7
5.2 lnc-ASCL1-6:7